Publications using PyFibers¶
If you use PyFibers in your research, please consider adding your publication to this list by opening a pull request on GitHub.
Journal articles¶
Marshall DP, Farah ES, Musselman ED, Pelot NA, Grill WM (2025) PyFibers: An open-source NEURON-Python package to simulate responses of model nerve fibers to electrical stimulation. PLoS Comput Biol 21(12): e1013764. https://doi.org/10.1371/journal.pcbi.1013764
Marshall DP, Upadhye AR, Buyukcelik ON, Shoffstall AJ, Grill WM, Pelot NA (2026) Computational modeling of human vagus nerve stimulation with three-dimensional fascicular morphology. APL Bioeng 10(1): 016112. https://doi.org/10.1063/5.0308450
Lung D, Jia Y, Moro A, Fachino M, Haberbusch M (2026) golgi: open-source software for automated nerve model generation and recruitment simulation. SoftwareX 36: 103094. https://doi.org/10.1016/j.softx.2026.103094
Conference papers¶
Atchuthan NA, Grill WM, Meijs S (2025) Exploring Tonic and Burst Stimulation in Neural Fibers: A Computational Modeling Approach. Annu Int Conf IEEE Eng Med Biol Soc 2025:1-6. https://doi.org/10.1109/EMBC58623.2025.11253067
Jantz MK, Grill WM, Hamer EL (2026) Mechanisms of kilohertz-frequency nerve conduction block vary by frequency. Neuromodulation 29(7): e38. https://doi.org/10.1016/j.neurom.2026.06.062
Preprints¶
Pelot NA, Baumgart I, Blitz A, Brunsman B, et al. (2025) The human vagal complex: from gross anatomy to single neurons, from brainstem to abdomen. Research Square. https://doi.org/10.21203/rs.3.rs-7707775/v1
Lung D, Jia Y, Blumer R, Reissig L, Zopf LM, Heimel P, Kraus C, Moro A, Fachino M, Haberbusch M (2026) golgi: an open-source graphical platform for image-to-recruitment modeling of peripheral nerve stimulation. bioRxiv 2026.07.10.737529. https://doi.org/10.64898/2026.07.10.737529
Lung D, Haberbusch M (2026) jaxon: a differentiable, GPU-native simulator for peripheral-nerve fiber models. bioRxiv 2026.07.30.741846. https://doi.org/10.64898/2026.07.30.741846
Haberbusch M, Lung D (2026) A GPU-native, differentiable fiber simulator reveals a species-dependent selectivity penalty in reduced-order peripheral-nerve models. Research Square. https://doi.org/10.21203/rs.3.rs-10543706/v1